Insertion junction: CLIP2.013951_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.013951
Chromosome:chromosome 12
Location:4151677
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g517451 (1 of 1) PTHR31773:SF9 - METACASPASE-1 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCAGTGGCTCAAGGGACGCCTTATACAGCGAGGCGGGGTCAACGAGAAGC
Internal bar code:CGCTTGGTATAGGAGTCCTGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1737
LEAP-Seq percent confirming:96.6667
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:AGGTCTGCTGGTAGGGGTAG
Suggested primer 2:GTTCACATCGTTCAGGCAGC