Insertion junction: CLIP2.013952_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.013952
Chromosome:chromosome 10
Location:1161360
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g425700 NUP107 (1 of 1) K14301 - nuclear pore complex protein Nup107 (NUP107, NUP84); Nucleoporin 107 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTGTAAGTACCAGCCCAAACTGGGGGAACCGAAACGGACAGGAGGGAAA
Internal bar code:TTACTCGTTCGAAGTCCAAGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:366
LEAP-Seq percent confirming:78.5714
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:CAACGACTCGCTTATGCAGC
Suggested primer 2:GTTGGAGTCCCAGCTCAGTC