Insertion junction: CLIP2.013961_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.013961
Chromosome:chromosome 11
Location:3527952
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g477750 (1 of 1) IPR016201 - Plexin-like fold intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTAGGAACCGGCAGCGCCGTGGCGCACGGAATGAAGACAGGGGTTCTGC
Internal bar code:TCCGGCTACTGGGGCGTAGTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1924
LEAP-Seq percent confirming:94.5455
LEAP-Seq n confirming:52
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:55

Suggested primers for confirmation by PCR

Suggested primer 1:CAGTATTGCCCAACGGGTCT
Suggested primer 2:TCTTCGTCATGCTTCCACCC