Insertion junction: CLIP2.013962_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.013962
Chromosome:chromosome 9
Location:3388430
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g395658 (1 of 52) 2.7.11.22 - Cyclin-dependent kinase / Cdk-activating protein kinase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATTGGAGATGTACGGTAGACTATATCGCTAGAAAATCGGCAGGTAGTGC
Internal bar code:GTGAGCTGTATGCTGCGCGTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:3956
LEAP-Seq percent confirming:87.3016
LEAP-Seq n confirming:55
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:63

Suggested primers for confirmation by PCR

Suggested primer 1:AACATACGTGTCAGCGTGGT
Suggested primer 2:CCTTTTGTGAGTGCAGGTGC