Insertion junction: CLIP2.013965_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.013965
Chromosome:chromosome 6
Location:3149413
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g275800 HTB31,HTB4,HTB3 (1 of 27) K11252 - histone H2B (H2B); Histone H2B CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTTCTTGGCGGCCTTCTCGGCCTTGGGCTTGGCCTCAGCCTTGGCAGGA
Internal bar code:GGACTCCTATACGGGGCTGTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1443
LEAP-Seq percent confirming:83.3333
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:TCACCAAACCCGTTCCCAAA
Suggested primer 2:GTACACAGTACCACCCTGGC