Insertion junction: CLIP2.013965_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.013965
Chromosome:chromosome 13
Location:1531083
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g572800 TILS1,TILS tRNA-Ile Lysidine synthase, organelle; (1 of 1) 6.3.4.19 - tRNA(Ile)-lysidine synthetase / Isoleucine-specific transfer ribonucleate lysidine synthetase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAACCGTAATGCGAACACGCATCACTTCCCCAGCCACAGCCTGCTTCGCT
Internal bar code:GAGTGGGAAGCGAGCTCAAAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:247
LEAP-Seq percent confirming:1.85185
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:53
LEAP-Seq n unique pos:54

Suggested primers for confirmation by PCR

Suggested primer 1:CAGGAGTTGCATGAGCTGGA
Suggested primer 2:CGGTCATGTTGTGTTGCGTT