Insertion junction: CLIP2.013982_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.013982
Chromosome:chromosome 11
Location:4086492
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g481050 (1 of 10) PF00505 - HMG (high mobility group) box (HMG_box); High mobility group protein CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GATGCAGGAATATGCGAGCACCAAGAGCGACAGCGAGAGTGAGGCTCGGT
Internal bar code:TCTTTACGTCGTTAGATGAGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:3365
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:123
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:123

Suggested primers for confirmation by PCR

Suggested primer 1:GGACCGAACAAACAGCCAAC
Suggested primer 2:GATTGTTGCTGCAAGTGCCA