Insertion junction: CLIP2.013991_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.013991
Chromosome:chromosome 6
Location:3831965
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g278177 DNL6,LIG6 (1 of 1) PTHR10459:SF44 - ANKYRIN REPEAT-CONTAINING PROTEIN; DNA ligase 6 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGGGTAGCTGGAGTGCTCCGAGTAGGGCACCAGATGCACCGACAGCGCG
Internal bar code:CCACGATTTTAATAGAAAGAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1700
LEAP-Seq percent confirming:90.7692
LEAP-Seq n confirming:59
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:65

Suggested primers for confirmation by PCR

Suggested primer 1:CTGTCAGACGTGTTCACGGA
Suggested primer 2:CCTCATCCGAGATCAGCACC