Insertion junction: CLIP2.013992_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.013992
Chromosome:chromosome 16
Location:2043668
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g656950 (1 of 1) PTHR13140:SF300 - PROTEIN TAG-278-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCATTTAGGCGTTGTCTCAACCCTCGTCCTGTTTCCTCCTGTGGTTTCA
Internal bar code:TAGCCGAGTGACGGAAGCACAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1065
LEAP-Seq percent confirming:96.7742
LEAP-Seq n confirming:30
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:CCACAGGAAAACAAGGCAGC
Suggested primer 2:CCATATTGCAGTGCTGACGC