Insertion junction: CLIP2.014000_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.014000
Chromosome:chromosome 13
Location:1375619
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g571750 (1 of 1) PTHR10050 - DOLICHYL-PHOSPHATE-MANNOSE--PROTEIN MANNOSYLTRANSFERASE CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGGTATGTGGCAAAGGCGCGCGGGCCTCTCATCGCCAACCAGGCTGTCG
Internal bar code:ACCCCCAATAGAGTTGCGAAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:3445
LEAP-Seq percent confirming:99.4253
LEAP-Seq n confirming:173
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:174

Suggested primers for confirmation by PCR

Suggested primer 1:TCGCAGTAGTGTCACCAACC
Suggested primer 2:AGTGGCCGGAGATTTGAGTG