Insertion junction: CLIP2.014005_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.014005
Chromosome:chromosome 2
Location:6322109
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g387600 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAACGAAATGGGAGATCAGCAATACGGTACACGTTACTCAGAAGGAAACA
Internal bar code:TTTATCGTCTAGTTTTGCGCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1359
LEAP-Seq percent confirming:78.5714
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:CATTGGTGGCAAGCTGGTTG
Suggested primer 2:CCTCACCGTCATGTTGCTCT