Insertion junction: CLIP2.014007_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.014007
Chromosome:chromosome 1
Location:1940340
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g010750 RLS10 RegA/Rls-like protein; (1 of 1) IPR000104//IPR010919 - Antifreeze protein, type I // SAND domain-like CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTATGGCCGCTGCTGCCGGCGGCGGCGCCGGCGGCGGCTGCCGACGCGC
Internal bar code:CATGGGAGTTTGTGGTGGGTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1206
LEAP-Seq percent confirming:68.1818
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:AAACCCGTGTCTTGCATTGC
Suggested primer 2:TGCCGCCACTGTAATTGGAT