Insertion junction: CLIP2.014013_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.014013
Chromosome:chromosome 12
Location:7342680
Confidence (%):80
Locus systematic id Locus common name Defline Feature
lncRNA_TCONS_00232793

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACTTCATAACCTTCGAACTCAATCTAATTCCCCCATACACGTTCATCTT
Internal bar code:GGACAGTCTTTACAATGTAGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2797
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:41
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:41

Suggested primers for confirmation by PCR

Suggested primer 1:GGGAAGAGAGACGGTTTGGG
Suggested primer 2:ATAGCCGCTGTTCCCATAGC