Insertion junction: CLIP2.014013_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.014013
Chromosome:chromosome 12
Location:7342684
Confidence (%):80
Locus systematic id Locus common name Defline Feature
lncRNA_TCONS_00232793

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTTTACGGAGGCGGGGTGGGACTGGGGGCGGGCATGATCGCGCAGGTGG
Internal bar code:TTGTGGTTAACACCAGCAAGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1587
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:ATAGCCGCTGTTCCCATAGC
Suggested primer 2:GGGAAGAGAGACGGTTTGGG