Insertion junction: CLIP2.014018_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.014018
Chromosome:chromosome 17
Location:3165480
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g720900 (1 of 100) IPR001810 - F-box domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGGCCGCACGGCATGGGGCCGAAGTGGGTCGGCTGTGTGCGGTCACGGA
Internal bar code:CGCGGAAGAATCGACGGTGGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:873
LEAP-Seq percent confirming:87.5
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:CCATGCATGCACACATACCG
Suggested primer 2:CTCAGCTGACCCTCAACCTG