Insertion junction: CLIP2.014025_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.014025
Chromosome:chromosome 8
Location:2912852
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g374400 (1 of 1) PTHR19920//PTHR19920:SF0 - WD40 PROTEIN CIAO1 // CYTOSOLIC IRON-SULFUR PROTEIN ASSEMBLY PROTEIN CIAO1-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCAGATCCGAATGTCATTGTTGCTGGGGTGACACCGAACGGGCTTGAGGC
Internal bar code:CTTTTGGAGACTCTTATACGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:817
LEAP-Seq percent confirming:97.619
LEAP-Seq n confirming:41
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:42

Suggested primers for confirmation by PCR

Suggested primer 1:CCCTTCCTTACGCACACAGT
Suggested primer 2:GAATTTCCGCAGTGATCCGC