Insertion junction: CLIP2.014032_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.014032
Chromosome:chromosome 13
Location:3495718
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g587550 FXL3 FixL-like PAS domain protein; (1 of 12) 2.7.13.3 - Histidine kinase / Protein kinase (histidine) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTGGCAGCAGTGCCGCTCTCCTGTACGGTGCATGACGCAAAGCAATTCT
Internal bar code:CATGTGTTAATAACATGTTCAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1378
LEAP-Seq percent confirming:95.4545
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:AAGGCGGCGGGTAATTTGTA
Suggested primer 2:TGCAAGAACGGAAAAGCGTG