Insertion junction: CLIP2.014041_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.014041
Chromosome:chromosome 1
Location:5177761
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g036150 (1 of 1) PTHR14095:SF0 - PROTEIN C06G1.5, ISOFORM B CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCCCCCGAGGGTGGTCGCGGCGAGGGTGTGCCGCTGCCCGCGCTGCTTC
Internal bar code:TGCCCATGCGTCGCCGGATGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1816
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:38
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:38

Suggested primers for confirmation by PCR

Suggested primer 1:CAGGCAGAGAGTTGCTGGAA
Suggested primer 2:CACGTTGTCCTCTCTCCCAC