Insertion junction: CLIP2.014055_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.014055
Chromosome:chromosome 3
Location:2169823
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g157050 (1 of 1) IPR020966 - Aluminum-activated malate transporter CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGGAGCGAATGGAGGCGGCTGCGGCCAACGCACACACCAGTGGCGCCGC
Internal bar code:CGGCGGCGGGTGCGGCAATGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:1098
LEAP-Seq percent confirming:94.4444
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:CGTAGATCTCGCCCTTCACC
Suggested primer 2:ACCATTCCGACTCCGTCCTA