Insertion junction: CLIP2.014072_3

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.014072
Chromosome:chromosome 6
Location:8199911
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g306150 (1 of 1) IPR000104//IPR004919 - Antifreeze protein, type I // Domain of unknown function DUF262 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCATGTGTAACAGCACCACAGGGTGGTGGCGCCCTAAAGCCCGAGTCCC
Internal bar code:GTGGGATTGCACTTCGTGGTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:407
LEAP-Seq percent confirming:80.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:GCTGCCAAGGTTCAAATGGG
Suggested primer 2:CGTGTGCAGATGTGTGTGTG