Insertion junction: CLIP2.014087_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.014087
Chromosome:chromosome 12
Location:9526801
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g540200 HEL58 (1 of 5) K12823 - ATP-dependent RNA helicase DDX5/DBP2 (DDX5, DBP2); DEAD/DEAH box helicase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGCCCGCAGCAGCTGCACCCCCCGCCGCCTTGTCTGCCGCCGCGGCCTT
Internal bar code:TACCGTAAGATATGTTATTATG

Confirmation - LEAP-Seq

LEAP-Seq distance:1103
LEAP-Seq percent confirming:62.5
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:GAAGATGGCCAAGCAGCAAC
Suggested primer 2:ATAGTTGCAGTGCACCGTCA