Insertion junction: CLIP2.014087_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.014087
Chromosome:chromosome 12
Location:9526806
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g540200 HEL58 (1 of 5) K12823 - ATP-dependent RNA helicase DDX5/DBP2 (DDX5, DBP2); DEAD/DEAH box helicase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGCTGGCGGCAAAGCGGAGTCGGTGTGGGGCTTGCCGCAGCGGAACAAG
Internal bar code:TACCGTAAGATATGTTATTATG

Confirmation - LEAP-Seq

LEAP-Seq distance:389
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:ATAGTTGCAGTGCACCGTCA
Suggested primer 2:GAAGATGGCCAAGCAGCAAC