Insertion junction: CLIP2.014090_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.014090
Chromosome:chromosome 12
Location:3359740
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g498350 RBM25,SRE1,SRS7 Pre-mRNA splicing factor, SR-related; (1 of 1) K13168 - splicing factor, arginine/serine-rich 16 (SFRS16) CDS
Cre12.g498400 outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCTCGGAACACAGAGTCTCATGCCAACCTTGAGAACGGCGTCGGCCTCA
Internal bar code:CGCTAAGGGTTTTGAGATATAT

Confirmation - LEAP-Seq

LEAP-Seq distance:2753
LEAP-Seq percent confirming:87.2727
LEAP-Seq n confirming:48
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:55

Suggested primers for confirmation by PCR

Suggested primer 1:CCCTCCCTGCTGTCCATTTT
Suggested primer 2:ATTCTGAATTGACTGCGCGC