Insertion junction: CLIP2.014093_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.014093
Chromosome:chromosome 17
Location:476182
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g699000 PAT1 Phosphate acetyltransferase; (1 of 2) 2.3.1.8 - Phosphate acetyltransferase / Phosphotransacetylase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCGTTGCCTCCGGTTGCAACGGAACCCCACGATGACCTCTCTTGCCTGC
Internal bar code:AGGATTAACGAGACTTTGAAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:165
LEAP-Seq percent confirming:70.5882
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:GTGCCTGTGCTCCACTAGTT
Suggested primer 2:GTGTTGAGTGTGTGTGGTGC