Insertion junction: CLIP2.014097_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.014097
Chromosome:chromosome 11
Location:3819457
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g479383 (1 of 1) IPR000104//IPR013122 - Antifreeze protein, type I // Polycystin cation channel, PKD1/PKD2 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGTCGGTTGGTTGCGGCGCTCACCTGTTCTTGGATGTAAGAGTTCCTTG
Internal bar code:TTTTGATGACACTTATTTACAG

Confirmation - LEAP-Seq

LEAP-Seq distance:4719
LEAP-Seq percent confirming:10.1449
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:62
LEAP-Seq n unique pos:69

Suggested primers for confirmation by PCR

Suggested primer 1:ACTAACCACTTTCGCGCTCA
Suggested primer 2:TGAGTTCTGCAAAAGCGTGC