Insertion junction: CLIP2.014112_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.014112
Chromosome:chromosome 10
Location:4135994
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g448700 (1 of 1) K11650 - SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D (SMARCD) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACCCAACCCAACCCAAACCCAACCCACAGCCTAGACAACCTCACCAAAT
Internal bar code:ACCCTGACGTCCTACTAGTTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:196
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:ATAGGAGCTGTCGGGAAGGT
Suggested primer 2:TCCGACGCAACTGATCACAA