Insertion junction: CLIP2.014117_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.014117
Chromosome:chromosome 2
Location:3924670
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g101950 TRM2B,TMU2 tRNA (uracil-5)-methyltransferase; (1 of 1) K15332 - tRNA (uracil-5-)-methyltransferase [EC:2.1.1.-] (TRMT2A) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCTGTCTGACGCACATGCCCCCCCCCCGCTTCCACCGGCAGGGCCGCTG
Internal bar code:CAAAAGCGGGGGCTTAAATTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:951
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:CTTCTTGGACTGCAGGCAGA
Suggested primer 2:ACGCCATCCTCCTAACTCCT