Insertion junction: CLIP2.014120_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.014120
Chromosome:chromosome 6
Location:593622
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g253200 PKY1 Protein tyrosine kinase; (1 of 1) PTHR23257:SF534 - SERINE/THREONINE-PROTEIN KINASE ROCO7-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTGATGTTGCGTCACCGGCATTGTATTCCATGGCTGAATGGGCTTCCCA
Internal bar code:TATTATCAGGGGCGGGCTATAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2920
LEAP-Seq percent confirming:96.0
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:GTAACCGCCGTCCTGACTAG
Suggested primer 2:CACCAACGCCACCTACATCT