Insertion junction: CLIP2.014121_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.014121
Chromosome:chromosome 13
Location:3643623
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g588100 CYN19C,ROC2,CYN5,CYN19-3 (1 of 1) K09565 - peptidyl-prolyl isomerase F (cyclophilin D) (PPIF); Cyclophilin 19-3 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTAGAGGGACCTACCGCCGCCGCTGCCCGGCTGCCGTGGTCACCGAACC
Internal bar code:TTAGAAGCATCATTGCGCGAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:273
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:AGCACAAGCCATGGTAGCAT
Suggested primer 2:ACAGCGCTCGATTCTAGCTC