Insertion junction: CLIP2.014123_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.014123
Chromosome:chromosome 1
Location:3717216
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g024250 HEL4 DEAH box ATP-dependent RNA helicase; (1 of 1) 1.14.13.101 - Senecionine N-oxygenase / Senecionine monooxygenase (N-oxide-forming) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGATGTGGCGGCAGCCATGCGGGCGTCCATGGTGGGTGCGGCGCGTGGGA
Internal bar code:TGAGCCTACTCAAGGTACAGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1166
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:TGTCAAGGGCTCGACGTAAC
Suggested primer 2:GTGGGGTGATGATGGGAAGG