Insertion junction: CLIP2.014124_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.014124
Chromosome:chromosome 1
Location:3546074
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g023050 UBX2 (1 of 2) IPR006567//IPR018997 - PUG domain // PUB domain; Ubiquitin-associated protein CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCGGATGCGCTCCTTCTCCGCGCTCTCCTTGGACAGCTTGTCCTCCTTC
Internal bar code:GGGTGCGAACGATAATGTTCGC

Confirmation - LEAP-Seq

LEAP-Seq distance:69
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:TGGAGATGTGGAATGTGGGC
Suggested primer 2:AACAGTGCCCCCTAGAATGC