Insertion junction: CLIP2.014126_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.014126
Chromosome:chromosome 9
Location:6530888
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g415800 (1 of 1) K16865 - programmed cell death protein 4 (PDCD4) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATGGCGAGCCGGGTTCTTCTGCACAGGCTCTATGTTACTTAAAAAAATC
Internal bar code:TAGTTTGCAAGTGGTGGCAGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1484
LEAP-Seq percent confirming:89.7436
LEAP-Seq n confirming:35
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:39

Suggested primers for confirmation by PCR

Suggested primer 1:GCAGGCAGGCTAGACTTGAA
Suggested primer 2:ATCGGCATAGGAGCACGAAG