Insertion junction: CLIP2.014127_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.014127
Chromosome:chromosome 7
Location:2422246
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g328900 CDPK3,CDPK9 (1 of 6) PTHR24349//PTHR24349:SF23 - SERINE/THREONINE-PROTEIN KINASE // MAP KINASE-ACTIVATED PROTEIN KINASE 5; Calcium/calmodulin-dependent protein kinase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGAGGAAGCGGGCAGATGCGGAGGGAGGGACGAGCTCGCTCCCACGCCAT
Internal bar code:AAGTGATGGCCGGTAAAGCGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:4247
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:89
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:89

Suggested primers for confirmation by PCR

Suggested primer 1:CCAAACTAGCGCGCATGTAC
Suggested primer 2:TCACTGCCGAAGTTCTGGAC