Insertion junction: CLIP2.014129_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.014129
Chromosome:chromosome 9
Location:2444455
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g393400 VTE4 Tocopherol O-methyltransferase/gamma-tocopherol methyltransferase; (1 of 1) 2.1.1.95 - Tocopherol O-methyltransferase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCCCCCTCGAGGTTAGAGTAGCGGGGGTTGCGCGATTTCCGGTTGGTAA
Internal bar code:TAAGTTATCTGGGCCGGGTGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:2906
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:ATGCAGCCCGAAGACAAGAA
Suggested primer 2:CGACCGGTTGTGTTTGTCAC