Insertion junction: CLIP2.014134_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.014134
Chromosome:chromosome 6
Location:107340
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g249700 (1 of 1) IPR003690//IPR017956//IPR020478 - Mitochodrial transcription termination factor // AT hook, DNA-binding motif // AT hook-like CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTGCGTGCGCGGGTGTTGGCGCTCAAGGAGGTGGGTACCGGTGGCGGTG
Internal bar code:ACTCCGCGGTCGGTACTGTATG

Confirmation - LEAP-Seq

LEAP-Seq distance:356
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:CCAGAGTCAGGTCATCCAGC
Suggested primer 2:CAGTCAGTGGATGGCAGTGT