Insertion junction: CLIP2.014134_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.014134
Chromosome:chromosome 6
Location:107343
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g249700 (1 of 1) IPR003690//IPR017956//IPR020478 - Mitochodrial transcription termination factor // AT hook, DNA-binding motif // AT hook-like CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTGGTGCAGCCCCGTCCCGCAGCCGCTTCCAGCTGTGAGCAGGGCATAA
Internal bar code:CGCAGTGTTACTTCCAAGTTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:4241
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:58
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:58

Suggested primers for confirmation by PCR

Suggested primer 1:CAGTCAGTGGATGGCAGTGT
Suggested primer 2:CCAGAGTCAGGTCATCCAGC