Insertion junction: CLIP2.014137_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.014137
Chromosome:chromosome 17
Location:3903506
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g727801 (1 of 80) IPR003882 - Pistil-specific extensin-like protein CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTAGCAGTAGCAGCGGCGCACGCCGGGCGGTGCTACAGCAGGCAGTGGTG
Internal bar code:ATCAGACCTTGATACTGATTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:2023
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:CTGATCACCAACACCGTGGA
Suggested primer 2:GTGAGCAGCAGTGAAGACCT