Insertion junction: CLIP2.014140_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.014140
Chromosome:chromosome 13
Location:1930223
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g576100 (1 of 30) PTHR24349//PTHR24349:SF79 - SERINE/THREONINE-PROTEIN KINASE // NITROGEN NETWORK KINASE 1 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCACGTGCACTGCTGCTGGCGGCTGCGGTCCCGGCACGCCATCACCCAC
Internal bar code:CATGTCAAGAATGGGGTTACGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1404
LEAP-Seq percent confirming:38.8889
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:AACAGCAGTACCAGCAGCAT
Suggested primer 2:TACTGCTGTTGTTGGCGCTA