Insertion junction: CLIP2.014150_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.014150
Chromosome:chromosome 17
Location:6548378
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g744947 (1 of 1) 2.1.1.230 - 23S rRNA (adenosine(1067)-2'-O)-methyltransferase / Thiostrepton-resistance methylase CDS
lncRNA_TCONS_00240319 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCACACTTACACCGGGTCCTGGTGGGGCCAGCCTTCAAGCGGCTCTGGG
Internal bar code:GGTTGGGAATAGTCGAGGCACC

Confirmation - LEAP-Seq

LEAP-Seq distance:892
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:AGCATCGTCCATGTCGTTGT
Suggested primer 2:ACGTTCCGGCATGTATGGTT