Insertion junction: CLIP2.014156_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.014156
Chromosome:chromosome 9
Location:5950548
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g412175 (1 of 2) 3.7.1.8 - 2,6-dioxo-6-phenylhexa-3-enoate hydrolase / HOHPDA hydrolase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGGAGGCCGTCGCTGCGGCCCTGCGGCTGCAGATTGCGCAGCGCCGCCA
Internal bar code:GTTTCGCCCAGCGGCGTCCCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1327
LEAP-Seq percent confirming:84.6154
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:GCACTACCACCACCACTACC
Suggested primer 2:CAGTAGCATCGGCAGCAGTA