Insertion junction: CLIP2.014158_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.014158
Chromosome:chromosome 10
Location:4078192
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g448150 (1 of 6) PF01847 - von Hippel-Lindau disease tumour suppressor protein (VHL) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGTCCCGCGCTTTCCTGCGGCCTCACGCGCCGCCTTGATGTACTGCCAC
Internal bar code:GGCATCCCGAACGCATCTTGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1576
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:AAGCCAGGTGGGTGTAATGG
Suggested primer 2:GTCGCACACACAAAGCCATT