Insertion junction: CLIP2.014173_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.014173
Chromosome:chromosome 4
Location:1169241
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g215600 (1 of 1) PTHR32183:SF6 - THIOCYANATE METHYLTRANSFERASE 1-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAAAAGCACCTATGCTATGCTTACCATTCTCGCTCCCAGCGGTCTGAAAA
Internal bar code:CCTTTAATTGAAAGATTGGAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:2313
LEAP-Seq percent confirming:98.3051
LEAP-Seq n confirming:58
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:59

Suggested primers for confirmation by PCR

Suggested primer 1:GCAGGTGTACGGAGGTGAAA
Suggested primer 2:CATTTTGAGCAAACGCCCCA