Insertion junction: CLIP2.014179_3

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.014179
Chromosome:chromosome 16
Location:4897108
Confidence (%):80
Locus systematic id Locus common name Defline Feature
intergenic

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGCAAGAGCAGAGGGTGGCGAGCAGCGTAGTCCCGAGTATGATGGCTGT
Internal bar code:GTAGGGGTAGGGAGGGAGGCCG

Confirmation - LEAP-Seq

LEAP-Seq distance:147
LEAP-Seq percent confirming:80.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:GCACATGGATGGATGCGTTC
Suggested primer 2:AGAAGGAGGAGAAGGCGCTA