Insertion junction: CLIP2.014182_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.014182
Chromosome:chromosome 9
Location:5390398
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g408250 EEF1A2 Eukaryotic translation elongation factor 1-alpha; (1 of 1) PTHR23115//PTHR23115:SF170 - TRANSLATION FACTOR // ELONGATION FACTOR 1-ALPHA 1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTGGAATTTGACTCTCCACACCAAACGACACGACACCATACCACACCAC
Internal bar code:TGGCGATGTCTCCGAACTCTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:238
LEAP-Seq percent confirming:83.3333
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:CCGAAACACAAACGCACCAT
Suggested primer 2:GGAGAGGGACACCAGCAATC