Insertion junction: CLIP2.014194_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.014194
Chromosome:chromosome 6
Location:3127243
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g275500 (1 of 4) IPR000104//IPR001471//IPR016177 - Antifreeze protein, type I // AP2/ERF domain // DNA-binding domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTTACTCGCTTGTGCCTCCGCAGGCGGCCGGGCTTCGCGGCGTCCGGAA
Internal bar code:GGCAGGATTGTTAATTTTTTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1111
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:GCCATGTGTACGGAGCGATA
Suggested primer 2:GCTAACGAAATGCCGAGCTG