Insertion junction: CLIP2.014204_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.014204
Chromosome:chromosome 3
Location:2879679
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g162400 HEATR2B,HTR2B,DNAAF5 (1 of 1) IPR011989//IPR016024//IPR021133 - Armadillo-like helical // Armadillo-type fold // HEAT, type 2; 5-Hydroxytryptamine Receptor 2B intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGGCCAAGCGGCGCGCACACATAAAAGCCTAACAGAGCAAACCCTTACG
Internal bar code:GGACGGGTGTACCGCGTGTACC

Confirmation - LEAP-Seq

LEAP-Seq distance:553
LEAP-Seq percent confirming:93.3333
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:TACCGCTATCCACCTGCATG
Suggested primer 2:CAATCTCCTCCTCGGCATCC