Insertion junction: CLIP2.014205_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.014205
Chromosome:chromosome 11
Location:914154
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467654 (1 of 1) K13117 - ATP-dependent RNA helicase DDX35 [EC:3.6.4.13] (DHX35) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGTCGCCGGTACTTGCTGACGGGGAGGGAGGGGTCGCCGTAGCGGTAGG
Internal bar code:GTGCGTCGCGTTGCAGTATGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1780
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:GATGAGAGCGGGAATGGAGG
Suggested primer 2:CTTTCCACCCTCCCCACTTC