Insertion junction: CLIP2.014230_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.014230
Chromosome:chromosome 15
Location:620931
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre15.g636700 (1 of 58) PTHR12393//PTHR12393:SF6 - SPHINGOMYELIN PHOSPHODIESTERASE RELATED // SPHINGOMYELIN PHOSPHODIESTERASE 2 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACACGCACGCCAGCTGCTGCCCGCCTCCAGATCCCGACCCATGCCAACG
Internal bar code:TGCATTCAGAATAACTTTATAC

Confirmation - LEAP-Seq

LEAP-Seq distance:508
LEAP-Seq percent confirming:96.0
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:TGGAGGAGGATGGGGAAGAG
Suggested primer 2:CCGAATGGCAATGCTACAGC