Insertion junction: CLIP2.014250_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.014250
Chromosome:chromosome 3
Location:3861838
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g170400 (1 of 1) PF12579 - Protein of unknown function (DUF3755) (DUF3755) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGAATCCTTTTTGCCAATTTTGCGTCGTGTACCCACAGTTCACGCCAGT
Internal bar code:CCCAGCGGCGGAGGTAGTTAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:3355
LEAP-Seq percent confirming:92.8571
LEAP-Seq n confirming:39
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:42

Suggested primers for confirmation by PCR

Suggested primer 1:GTCCCGATAGCGCATGAGAA
Suggested primer 2:ATACTCCTAGTGGCCCAGCA