Insertion junction: CLIP2.014255_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.014255
Chromosome:chromosome 3
Location:5884403
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g188550 HEL20 (1 of 1) K14806 - ATP-dependent RNA helicase DDX31/DBP7 [EC:3.6.4.13] (DDX31, DBP7); DEAD/DEAH box helicase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCAGTGGTAGGTACATCTGCTAACACACCTCACACCCCACACCCCGCAC
Internal bar code:AAACAGGGTGGGGTACCTTTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1820
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:CACCTGCAGGCTGTTCAAAC
Suggested primer 2:TGAATGTAACCCACCGCGAA